Browsing by Subject "operational taxonomic units (OTU)"
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Supplementary material 1 from: Theissinger K, Kästel A, Elbrecht V, Makkonen J, Michiels S, Schmidt S, Allgeier S, Leese F, Brühl C (2018) Using DNA metabarcoding for assessing chironomid diversity and community change in mosquito controlled temporary wetlands. Metabarcoding and Metagenomics 2: e21060. https://doi.org/10.3897/mbmg.2.21060
(2018)We provide all information regarding the library preparation.
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Supplementary material 2 from: Theissinger K, Kästel A, Elbrecht V, Makkonen J, Michiels S, Schmidt S, Allgeier S, Leese F, Brühl C (2018) Using DNA metabarcoding for assessing chironomid diversity and community change in mosquito controlled temporary wetlands. Metabarcoding and Metagenomics 2: e21060. https://doi.org/10.3897/mbmg.2.21060
(2018)Pipeline used for bioinformatic processing of metabarcoding data in Theissinger et al.
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Supplementary material 3 from: Theissinger K, Kästel A, Elbrecht V, Makkonen J, Michiels S, Schmidt S, Allgeier S, Leese F, Brühl C (2018) Using DNA metabarcoding for assessing chironomid diversity and community change in mosquito controlled temporary wetlands. Metabarcoding and Metagenomics 2: e21060. https://doi.org/10.3897/mbmg.2.21060
(2018)We pooled the library according to the number of specimens per sample and could show that our read abundance highly correlates with specimen abundance. Thus, we could use the read abundancies as surrogates for relative ...
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Supplementary material 4 from: Theissinger K, Kästel A, Elbrecht V, Makkonen J, Michiels S, Schmidt S, Allgeier S, Leese F, Brühl C (2018) Using DNA metabarcoding for assessing chironomid diversity and community change in mosquito controlled temporary wetlands. Metabarcoding and Metagenomics 2: e21060. https://doi.org/10.3897/mbmg.2.21060
(2018)OTU ID, taxonomy of identified species, BOLD Bin, sequence abundancies per site an time and OTU sequences
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Using DNA metabarcoding for assessing chironomid diversity and community change in mosquito controlled temporary wetlands
(Pensoft Publishers, 2018)The biocide Bacillus thuringiensis var. israelensis (Bti) is widely applied for mosquito control in temporary wetlands of the German Upper Rhine Valley. Even though Bti is considered environmentally friendly, several studies ...Tieteelliset aikakauslehtiartikkelit